Release 4

This page is part of a downloaded copy of this specification. This page is part of the FHIR Specification (v4.0.1: R4 - Mixed Normative and STU). For a full list of available versions, see the Directory of published versions

10.6.12 Resource MolecularSequence - Maturity Dependency View

Clinical Genomics Work GroupMaturity Level: 1 Trial Use Compartments: Patient

Dependency Graph for MolecularSequence FMM level 1

NameCard.TypeDependency Analysis
.. MolecularSequence DomainResource
... identifier 0..*Identifier
... type 0..1code
... coordinateSystem 1..1integer
... patient 0..1Reference(Patient)
... specimen 0..1Reference(Specimen)
... device 0..1Reference(Device)
... performer 0..1Reference(Organization)
... quantity 0..1Quantity
... referenceSeq 0..1BackboneElement
.... chromosome 0..1CodeableConcept
.... genomeBuild 0..1string
.... orientation 0..1code
.... referenceSeqId 0..1CodeableConcept
.... referenceSeqPointer 0..1Reference(MolecularSequence)
.... referenceSeqString 0..1string
.... strand 0..1code
.... windowStart 0..1integer
.... windowEnd 0..1integer
... variant 0..*BackboneElement
.... start 0..1integer
.... end 0..1integer
.... observedAllele 0..1string
.... referenceAllele 0..1string
.... cigar 0..1string
.... variantPointer 0..1Reference(Observation)
... observedSeq 0..1string
... quality 0..*BackboneElement
.... type 1..1code
.... standardSequence 0..1CodeableConcept
.... start 0..1integer
.... end 0..1integer
.... score 0..1Quantity
.... method 0..1CodeableConcept
.... truthTP 0..1decimal
.... queryTP 0..1decimal
.... truthFN 0..1decimal
.... queryFP 0..1decimal
.... gtFP 0..1decimal
.... precision 0..1decimal
.... recall 0..1decimal
.... fScore 0..1decimal
.... roc 0..1BackboneElement
..... score 0..*integer
..... numTP 0..*integer
..... numFP 0..*integer
..... numFN 0..*integer
..... precision 0..*decimal
..... sensitivity 0..*decimal
..... fMeasure 0..*decimal
... readCoverage 0..1integer
... repository 0..*BackboneElement
.... type 1..1code
.... url 0..1uri
.... name 0..1string
.... datasetId 0..1string
.... variantsetId 0..1string
.... readsetId 0..1string
... pointer 0..*Reference(MolecularSequence)
... structureVariant 0..*BackboneElement
.... variantType 0..1CodeableConceptBinding Error: Unable to resolve vs 'http://loinc.org/vs/LL379-9' to check dependencies
.... exact 0..1boolean
.... length 0..1integer
.... outer 0..1BackboneElement
..... start 0..1integer
..... end 0..1integer
.... inner 0..1BackboneElement
..... start 0..1integer
..... end 0..1integer